# Apply function to every pair of columns in two matrices in MATLAB

Try

`na = size(A,1); nb = size(B,1); newvector = bsxfun(@(j,k)(func(A(j,:),B(k,:))),1:na,(1:nb)');`

`bsxfun`

performs one-color expansion by 1: na and (1: nb) '. The end result in this case is that func will be applied to every pair of column vectors taken from A and B.

Note that bsxfun can be tricky: it may require the application function to support singleton expansion. In this case, it will work to get the job done.

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Do you mean in pairs? So during the loop, the function will work like `scalar_val = func(A(i),B(i))`

?

If `A`

both `B`

are the same size, you can use the ARRAYFUN function :

```
newvector = arrayfun(@(x) func(A(x),B(x)), 1:numel(A));
```

** UPDATE**

As per your comment, you need to execute all combinations of A and B as `scalar_val = func(A(i), B(j))`

. This is a little more complicated and for large vectors it can fill up memory quickly.

If your function is standard, you can try using BSXFUN :

`out = bsxfun(@plus, A, B');`

Another way is to use MESHGRID and ARRAYFUN:

```
[Am, Bm] = meshgrid(A,B);
out = arrayfun(@(x) func(Am(x),Bm(x)), 1:numel(Am));
out = reshape(out, numel(A), numel(B));
```

I believe it should work, but I don't have time to test it now.

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