SonarQube Analysis Timeout

We previously discussed the issue with the now closed SonarQube user mailing list .

The problem was solved by sharing for about half a week, optimizing the Postgre DB, then the problem stuck again.

We are using Jenkins 1.612 using SonarQube Jenkins Plugin 2.2.1, Sonar 5.1 using Postgre 9.1 base.

• We have about 20 JAVA projects / branches running, using a lot of legacy code and having about 1.2 million LOC and 130k questions.
• There are about 30 projects of JAVA project modules having 1K-20K LOC and less than 2k.
• There are about 50 custom JAVA projects with less than 200k LOCs and less than 10k issues.
• Our projects are written in JAVA (6/7) and using ANT 50% or Gradle 50% as build tools.

Now we get this error again:

Gestartet durch vorgelagertes Projekt "Project__Branch__ant__dbTest", Build 86
originally caused by:
 Gestartet durch vorgelagertes Projekt "Project__Branch__ant__build", Build 101
 originally caused by:
  Build wurde durch eine SCM-Änderung ausgelöst.
Baue auf Slave SonarQube (Sonar-Analyse) in Arbeitsbereich D:\Jenkins (prod-test)\workspace\Project__Branch__ant__sonar
Restoring workspace from build #101 of project Project__Branch__ant__build
[Project__Branch__ant__sonar] $ "D:\Jenkins (prod-test)\tools\hudson.plugins.sonar.SonarRunnerInstallation\sonar-runner-2.4\bin\sonar-runner.bat" -e -Dsonar.jdbc.url=jdbc:postgresql://localhost:5432/postgres ******** ******** -Dsonar.host.url=http://sonarqube:9000 ******** ******** "-Dsonar.projectBaseDir=D:\Jenkins (prod-test)\workspace\Project__Branch__ant__sonar" -Dsonar.branch=Branch
D:\Jenkins (prod-test)\tools\hudson.plugins.sonar.SonarRunnerInstallation\sonar-runner-2.4
SonarQube Runner 2.4
Java 1.7.0_45 Oracle Corporation (64-bit)
Windows Server 2008 R2 6.1 amd64
SONAR_RUNNER_OPTS=-Xmx2048m -XX:MaxPermSize=256m
INFO: Error stacktraces are turned on.
INFO: Runner configuration file: D:\Jenkins (prod-test)\tools\hudson.plugins.sonar.SonarRunnerInstallation\sonar-runner-2.4\conf\sonar-runner.properties
INFO: Project configuration file: D:\Jenkins (prod-test)\workspace\Project__Branch__ant__sonar\sonar-project.properties
INFO: Default locale: "de_DE", source code encoding: "windows-1252" (analysis is platform dependent)
INFO: Work directory: D:\Jenkins (prod-test)\workspace\Project__Branch__ant__sonar\.sonar
INFO: SonarQube Server 5.1
02:22:57.131 INFO  - Load global repositories
02:22:59.624 INFO  - Load global repositories (done) | time=2533ms
02:22:59.642 INFO  - Server id: 20150601083800
02:22:59.650 INFO  - User cache: C:\.sonar\cache
02:22:59.768 INFO  - Install plugins
02:23:05.720 INFO  - Install JDBC driver
02:23:05.781 INFO  - Create JDBC datasource for jdbc:postgresql://localhost:5432/postgres
02:23:14.096 INFO  - Initializing Hibernate
02:23:28.270 INFO  - Load project repositories
INFO: ------------------------------------------------------------------------
INFO: EXECUTION FAILURE
INFO: ------------------------------------------------------------------------
Total time: 1:05.593s
Final Memory: 38M/269M
INFO: ------------------------------------------------------------------------
ERROR: Error during Sonar runner execution
org.sonar.runner.impl.RunnerException: Unable to execute Sonar
    at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:91)
    at org.sonar.runner.impl.BatchLauncher$1.run(BatchLauncher.java:75)
    at java.security.AccessController.doPrivileged(Native Method)
    at org.sonar.runner.impl.BatchLauncher.doExecute(BatchLauncher.java:69)
    at org.sonar.runner.impl.BatchLauncher.execute(BatchLauncher.java:50)
    at org.sonar.runner.api.EmbeddedRunner.doExecute(EmbeddedRunner.java:102)
    at org.sonar.runner.api.Runner.execute(Runner.java:100)
    at org.sonar.runner.Main.executeTask(Main.java:70)
    at org.sonar.runner.Main.execute(Main.java:59)
    at org.sonar.runner.Main.main(Main.java:53)
Caused by: java.lang.IllegalStateException: Unable to request: /batch/project?key=Project%3ABranch&preview=false
    at org.sonar.batch.bootstrap.ServerClient.request(ServerClient.java:109)
    at org.sonar.batch.bootstrap.ServerClient.request(ServerClient.java:99)
    at org.sonar.batch.bootstrap.ServerClient.request(ServerClient.java:87)
    at org.sonar.batch.repository.DefaultProjectRepositoriesLoader.load(DefaultProjectRepositoriesLoader.java:55)
    at org.sonar.batch.repository.ProjectRepositoriesProvider.provide(ProjectRepositoriesProvider.java:40)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:606)
    at org.picocontainer.injectors.MethodInjector.invokeMethod(MethodInjector.java:129)
    at org.picocontainer.injectors.MethodInjector.access$000(MethodInjector.java:39)
    at org.picocontainer.injectors.MethodInjector$2.run(MethodInjector.java:113)
    at org.picocontainer.injectors.AbstractInjector$ThreadLocalCyclicDependencyGuard.observe(AbstractInjector.java:270)
    at org.picocontainer.injectors.MethodInjector.decorateComponentInstance(MethodInjector.java:120)
    at org.picocontainer.injectors.CompositeInjector.decorateComponentInstance(CompositeInjector.java:58)
    at org.picocontainer.injectors.Reinjector.reinject(Reinjector.java:142)
    at org.picocontainer.injectors.ProviderAdapter.getComponentInstance(ProviderAdapter.java:96)
    at org.picocontainer.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:698)
    at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:646)
    at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:631)
    at org.picocontainer.parameters.BasicComponentParameter$1.resolveInstance(BasicComponentParameter.java:118)
    at org.picocontainer.parameters.ComponentParameter$1.resolveInstance(ComponentParameter.java:136)
    at org.picocontainer.injectors.SingleMemberInjector.getParameter(SingleMemberInjector.java:78)
    at org.picocontainer.injectors.ConstructorInjector$CtorAndAdapters.getParameterArguments(ConstructorInjector.java:309)
    at org.picocontainer.injectors.ConstructorInjector$1.run(ConstructorInjector.java:335)
    at org.picocontainer.injectors.AbstractInjector$ThreadLocalCyclicDependencyGuard.observe(AbstractInjector.java:270)
    at org.picocontainer.injectors.ConstructorInjector.getComponentInstance(ConstructorInjector.java:364)
    at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.getComponentInstance(AbstractInjectionFactory.java:56)
    at org.picocontainer.behaviors.AbstractBehavior.getComponentInstance(AbstractBehavior.java:64)
    at org.picocontainer.behaviors.Stored.getComponentInstance(Stored.java:91)
    at org.picocontainer.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:698)
    at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:646)
    at org.picocontainer.DefaultPicoContainer.getComponent(DefaultPicoContainer.java:677)
    at org.sonar.api.platform.ComponentContainer.getComponentByType(ComponentContainer.java:209)
    at org.sonar.batch.scan.ProjectScanContainer.doBeforeStart(ProjectScanContainer.java:92)
    at org.sonar.api.platform.ComponentContainer.startComponents(ComponentContainer.java:90)
    at org.sonar.api.platform.ComponentContainer.execute(ComponentContainer.java:77)
    at org.sonar.batch.scan.ScanTask.scan(ScanTask.java:57)
    at org.sonar.batch.scan.ScanTask.execute(ScanTask.java:45)
    at org.sonar.batch.bootstrap.TaskContainer.doAfterStart(TaskContainer.java:135)
    at org.sonar.api.platform.ComponentContainer.startComponents(ComponentContainer.java:92)
    at org.sonar.api.platform.ComponentContainer.execute(ComponentContainer.java:77)
    at org.sonar.batch.bootstrap.GlobalContainer.executeTask(GlobalContainer.java:158)
    at org.sonar.batch.bootstrapper.Batch.executeTask(Batch.java:95)
    at org.sonar.batch.bootstrapper.Batch.execute(Batch.java:67)
    at org.sonar.runner.batch.IsolatedLauncher.execute(IsolatedLauncher.java:48)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:606)
    at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:87)
    ... 9 more
Caused by: java.net.SocketTimeoutException: Read timed out
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
    at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
    at sun.net.www.protocol.http.HttpURLConnection$6.run(HttpURLConnection.java:1675)
    at sun.net.www.protocol.http.HttpURLConnection$6.run(HttpURLConnection.java:1673)
    at java.security.AccessController.doPrivileged(Native Method)
    at sun.net.www.protocol.http.HttpURLConnection.getChainedException(HttpURLConnection.java:1671)
    at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1244)
    at java.net.HttpURLConnection.getResponseCode(HttpURLConnection.java:468)
    at org.sonar.api.utils.HttpDownloader$BaseHttpDownloader$HttpInputSupplier.getInput(HttpDownloader.java:298)
    at org.sonar.api.utils.HttpDownloader$BaseHttpDownloader$HttpInputSupplier.getInput(HttpDownloader.java:255)
    at org.sonar.batch.bootstrap.ServerClient.request(ServerClient.java:105)
    ... 59 more
Caused by: java.net.SocketTimeoutException: Read timed out
    at java.net.SocketInputStream.socketRead0(Native Method)
    at java.net.SocketInputStream.read(SocketInputStream.java:152)
    at java.net.SocketInputStream.read(SocketInputStream.java:122)
    at java.io.BufferedInputStream.fill(BufferedInputStream.java:235)
    at java.io.BufferedInputStream.read1(BufferedInputStream.java:275)
    at java.io.BufferedInputStream.read(BufferedInputStream.java:334)
    at sun.net.www.http.HttpClient.parseHTTPHeader(HttpClient.java:687)
    at sun.net.www.http.HttpClient.parseHTTP(HttpClient.java:633)
    at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1323)
    at sun.net.www.protocol.http.HttpURLConnection.getHeaderField(HttpURLConnection.java:2678)
    at java.net.URLConnection.getContentEncoding(URLConnection.java:533)
    at org.sonar.api.utils.HttpDownloader$BaseHttpDownloader$HttpInputSupplier.getInput(HttpDownloader.java:296)
    ... 61 more
ERROR: 
ERROR: Re-run SonarQube Runner using the -X switch to enable full debug logging.
Build step 'Invoke Standalone SonarQube Analysis' marked build as failure
Sending e-mails to: ****@****.**
Notifying upstream projects of job completion
Finished: FAILURE

      

        
        
        
      

    

I hope you can help find a solution to this problem. thank.

Edit: Health restored: Found a workaround if caused by Jenkins.

In this link there a similar problem for the older version of Sonar. They ran the url regularly to store the request in the database cache. It works for this problem as well.

In Jenkins, I installed the http Request plugin and before releasing the sonar analysis, I run http to get http: // mySonarQube: 9000 / batch / project? Key = myProjectKey & preview = false . This works around a real problem (DB query duration and timeout interval are not appropriate), but it can keep us up and running.

Sonar 5.2 will happen in the next few days. We will check this version and I hope the problems go away ... I'll let you know ...

https://jira.sonarsource.com/projects/SONAR/versions/11629