Reduce the size of a large matrix filled with only a few kinds of elements in R
I have a matrix sdist
in the R
following way.
library("babynames")
library("stringdist")
d <- babynames
sdist <- stringdistmatrix(d$name[1:1000], d$name[1001:10000], method="lv", useBytes = T)
sdist[sdist > 3] <- Inf
The size of this matrix is โโlarge, even if there are only a few element types.
object.size(sdist)
72000112 bytes
dim(sdist)
[1] 1000 9000
length(sdist)
[1] 9000000
table(sdist)
sdist
0 1 2 3 Inf
4093 12125 72937 381084 8529761
Is there a way to reduce the size of these types of matrices. I cannot use sparse matrices since the number 0s is less.
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